Gene: AT1G47870

Gene description

TAIR ID: AT1G47870

Short description: winged-helix DNA-binding transcription factor family protein

Pathogen responsiveness: -2.28

General responsiveness: -2.17


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process

cell morphogenesis, glucosinolate metabolic process, transcription, DNA-templated, negative regulation of cell division, regulation of transcription, cell division, DNA endoreduplication

GO cellular component

nucleolus, nucleus, transcription factor complex, cytoplasm

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity, protein heterodimerization activity, DNA binding

Protein domain

PfamPF02319, E2F/DP family winged-helix DNA-binding domain
PfamPF16421, E2F transcription factor CC-MB domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT2G44730, AT4G18770, AT1G61730, AT1G24260, AT5G61890, AT2G40950, AT1G44830

AT3G02910, AT3G54670, AT3G59550, AT4G07475, AT2G23370, AT5G60720, AT4G26055, AT2G11930, AT3G12280, AT5G12870, AT3G06770, AT5G27870, AT1G22660, AT5G55300, AT2G29605, AT3G54180, AT4G23780, AT1G67750, AT5G43516, AT5G18740, AT1G26550, AT3G18524, AT5G07020, AT5G44030, AT5G04630, AT5G37940, AT3G57930, AT2G16730, AT1G46696, AT3G45160, AT4G02820, AT3G30587, AT2G07690, AT1G15825, AT5G39400, AT1G14130, AT2G38080, AT1G32120, AT5G50510, AT5G59400, AT2G45090, AT5G18550, AT2G07815, AT3G09670, AT2G20840, AT5G04780, AT4G18750, AT5G43530, AT4G25260, AT2G04420, AT2G07724, AT2G40420, AT3G30750, AT5G50620, AT3G56330, AT5G60690, AT4G39800, AT5G23470, AT2G30490, AT2G12700, AT5G29574, AT5G47410, AT4G04250, AT5G13180, AT1G13690, AT2G06285, AT5G35118, AT4G14110, AT5G39390, AT3G10760, AT1G01180, AT4G06495, AT5G25580, AT1G65130, AT2G40600, AT3G06520, AT2G32490, AT5G33310, AT2G16750, AT3G01516, AT3G59270, AT3G02130, AT2G24900, AT5G27490, AT2G01918, AT2G20900, AT1G56415, AT2G21850, AT3G20890, AT2G36307, AT4G06502, AT3G11900, AT3G12060, AT1G57770, AT5G44610, AT2G37560, AT4G16265, AT3G53668, AT5G55660, AT3G16740, AT3G49170, AT2G23380, AT2G11170, AT2G11360, AT1G32110, AT3G02920, AT3G15111, AT5G02910, AT3G13410, AT4G10950, AT3G49180, AT3G55760, AT4G35450, AT1G18500, AT4G07315, AT2G07820, AT1G63020, AT1G20230, AT3G27290, AT3G12040, AT5G06770, AT1G71930, AT2G01010, AT5G14870, AT3G42557, AT4G07688, AT2G45460, AT2G01920, AT2G28560, AT3G18535, AT4G07690, AT4G33330, AT4G10110, AT3G60340, AT4G04635, AT4G06533, AT2G20550, AT4G17270, AT3G17300, AT3G06740, AT1G73190, AT3G02810, AT4G30750, AT5G44635, AT5G58130, AT3G30230, AT4G13890, AT4G33700, AT1G26220, AT5G27230, AT3G59410, AT3G29805, AT1G12080, AT2G07732, AT1G80720, AT5G52950, AT1G26840, AT3G61990, AT2G47230, AT3G04690, AT3G23090, AT4G35130, AT3G16730, AT5G15630, AT5G16600, AT1G30810, AT1G02120, AT5G28295, AT2G34800, AT1G75980, AT3G27520, AT5G17165, AT3G27890, AT1G26540, AT1G56423, AT5G08630, AT4G30760, AT2G36355, AT2G41740, AT3G59380, AT3G32130, AT3G28010, AT4G08657, AT3G49055, AT3G50070, AT3G43850, AT5G49800, AT5G49020, AT2G42750, AT2G37090, AT1G71695, AT1G20515, AT5G50717, AT3G06340, AT1G58350, AT5G57830, AT5G44640, AT4G35940, AT3G19450, AT1G08260, AT3G13420, AT3G10690, AT1G08250, AT4G28370, AT1G17760, AT5G37630, AT3G53670, AT3G24400, AT2G14170, AT2G12710, AT3G18740, AT5G41870, AT3G09660, AT3G52900, AT4G34440, AT1G80190, AT4G06608, AT4G14700, AT5G49300, AT5G42640, AT3G12290, AT4G26220, AT4G14120, AT5G52960, AT5G46320, AT1G64270, AT1G65200, AT1G66610, AT5G05320, AT3G42450, AT5G62380, AT5G09980, AT1G18440, AT5G49190, AT5G41860, AT1G20225, AT3G27060, AT5G17420, AT3G42556, AT1G73940, AT4G32570, AT4G03830, AT3G27640, AT1G11380, AT3G18730, AT1G79060, AT3G26670, AT4G32610, AT3G30490, AT5G45780, AT5G63910, AT5G30410, AT1G15830, AT5G29030, AT3G43790, AT5G60020, AT5G08640, AT3G15520, AT1G19110, AT3G59540, AT2G31270, AT1G05060, AT4G05508, AT1G31270, AT1G26530, AT4G07480, AT4G06501, AT5G13060, AT2G16780, AT4G29080, AT3G30500, AT3G30846, AT4G12917, AT5G22670, AT3G15909, AT1G52450, AT3G11430, AT3G30590, AT5G46280, AT1G32780, AT3G25870, AT3G14800, AT3G06410, AT5G35860, AT2G04410, AT2G23960, AT4G32710, AT1G58590, AT4G04710, AT1G17950, AT5G38930, AT1G55535, AT5G02470, AT2G37678, AT3G17290, AT2G24910, AT1G05020, AT5G35880, AT5G41880, AT1G52430, AT1G67810, AT3G50240, AT2G28110, AT3G53880, AT1G21960, AT2G20110, AT5G53740, AT3G06250, AT1G30490, AT5G38037, AT3G23740, AT1G61820, AT1G48580, AT3G56550, AT4G35930, AT5G30420, AT4G16141, AT5G63920, AT2G38410, AT4G18740, AT3G22260, AT5G64541, AT1G75150, AT4G07720, AT5G34903, AT2G42050, AT2G37640, AT3G02820, AT2G38960, AT1G32680, AT3G41768, AT5G16690, AT3G26680, AT5G47510, AT4G35985, AT3G26160, AT2G24320

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Differentially expressed condition

1 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.548.29E-10

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