gene detail

Gene description

TAIR ID: AT3G12040

Short description: DNA-3-methyladenine glycosylase (MAG)

Pathogen responsiveness: -0.12

General responsiveness: -1.77

Orthologous

Rice:

OS02G0774500

Maize:

GRMZM2G143535

Wheat: No orthologous gene

GO biological process

base-excision repair

GO cellular component

nucleus

GO molecular function

DNA-3-methylguanine glycosylase activity, alkylbase DNA N-glycosylase activity, DNA-3-methyladenine glycosylase activity, DNA-7-methylguanine glycosylase activity, DNA-7-methyladenine glycosylase activity, DNA binding

Protein domain

Pfam	PF02245, Methylpurine-DNA glycosylase (MPG)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03410: Base excision repair

Transcriptional regulation

Regulator:
AT1G47870, AT3G20770, AT5G14960

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	1.57	9.56E-03
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.60	2.43E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.73	6.15E-04
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	1.85	2.84E-04
GSE17464	Laer, control	Laer, Flg22 1 h	1.67	1.76E-04
GSE17464	Laer, control	Laer, Flg22 2 h	1.85	5.03E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.55	5.13E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.93	1.61E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.91	2.19E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.92	2.60E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.61	5.65E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.58	2.99E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.24	2.35E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.13	7.17E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.84	5.26E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.80	5.08E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.80	6.13E-10
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.81	4.46E-10
GSE73351	Ws-4, map65_3, control	Ws-4, map65_3, H.ara Emwa1 3 d	1.54	1.38E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.65	4.88E-04