Gene: AT5G49300
     


Gene description


TAIR ID: AT5G49300

Short description: GATA transcription factor 16

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, cell differentiation


GO cellular component


nucleus, transcription factor complex


GO molecular function


chromatin binding, transcription factor activity, sequence-specific DNA binding, RNA polymerase II regulatory region sequence-specific DNA binding, zinc ion binding, RNA polymerase II transcription factor binding, transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding


Protein domain


PfamPF00320, GATA zinc finger
SMARTSM00401, ZnF_GATA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G16857, AT4G16110, AT1G47870, AT5G61850, AT5G14960

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.834.95E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.053.62E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.906.77E-05






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