Gene: AT3G12280
     


Gene description


TAIR ID: AT3G12280

Short description: retinoblastoma-related 1

Pathogen responsiveness: -2.66

General responsiveness: -3.43

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G033828  

Wheat: No orthologous gene

GO biological process


cell fate specification, G1/S transition of mitotic cell cycle, regulation of nuclear division, regulation of transcription from RNA polymerase II promoter, regulation of genetic imprinting, regulation of cell growth, pollen development, regulation of cell cycle, leaf development, regulation of gene expression by genetic imprinting, regulation of DNA endoreduplication, cell differentiation, asymmetric cell division, gametophyte development, regulation of stem cell population maintenance, generative cell differentiation, cell cycle, trichome morphogenesis, transcription, DNA-templated, viral process, embryo sac development, palisade mesophyll development, guard cell fate commitment, synapsis, double fertilization forming a zygote and endosperm


GO cellular component


nucleus, cytosol


GO molecular function


protein binding


Protein domain


PfamPF08934, Rb C-terminal domain
PfamPF11934, Domain of unknown function (DUF3452)
PfamPF01858, Retinoblastoma-associated protein A domain
PfamPF01857, Retinoblastoma-associated protein B domain
SMARTSM01367, DUF3452
SMARTSM01368, RB_A

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Protein-protein interaction network


The number of partners (degree) is: 26 (Top10%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.532.17E-02






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