gene detail

Gene description

TAIR ID: AT5G13180

Short description: NAC domain containing protein 83

Pathogen responsiveness: -1.00

General responsiveness: -0.26

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

leaf senescence, transcription, DNA-templated, xylem development, multicellular organism development, response to salt stress, response to abscisic acid, negative regulation of transcription, viral process

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein binding, DNA binding

Protein domain

Pfam	PF02365, No apical meristem (NAM) protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G44730, AT5G05410, AT1G28470, AT1G30490, AT1G47870, AT4G28500, AT1G71930, AT1G61730, AT4G23980, AT1G24260, AT5G54680, AT5G06960, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.54	1.90E-05
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.28	1.86E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.87	3.57E-11
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.59	2.25E-08