Gene: AT1G63020
     


Gene description


TAIR ID: AT1G63020

Short description: nuclear RNA polymerase D1A

Pathogen responsiveness: -3.50

General responsiveness: -2.99

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G007681  

Wheat: No orthologous gene

GO biological process


gene silencing by RNA, production of siRNA involved in RNA interference, transcription, DNA-templated, long-distance posttranscriptional gene silencing, regulation of transcription


GO cellular component


DNA-directed RNA polymerase IV complex, nucleus, nucleoplasm, DNA-directed RNA polymerase III complex


GO molecular function


DNA-directed 5'-3' RNA polymerase activity, RNA polymerase III activity, protein binding, metal ion binding, DNA binding


Protein domain


PfamPF00623, RNA polymerase Rpb1, domain 2
PfamPF11523, Protein of unknown function (DUF3223)
PfamPF04997, RNA polymerase Rpb1, domain 1
PfamPF04983, RNA polymerase Rpb1, domain 3
PfamPF05000, RNA polymerase Rpb1, domain 4
SMARTSM00663, RPOLA_N

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G48160, AT2G36010, AT5G13790, AT1G47870, AT5G61850, AT4G36990, AT5G14960

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 24 (Top10%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.