Gene: AT1G30810
     

Gene description


TAIR ID: AT1G30810

Short description: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

Pathogen responsiveness: -2.04

General responsiveness: -2.68

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TA.9882.1.S1_AT  


GO biological process


photoperiodism, flowering, regulation of transcription, DNA-templated


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, histone demethylase activity (H3-K4 specific)


Protein domain


PfamPF02373, JmjC domain, hydroxylase
PfamPF05965, F/Y rich C-terminus
PfamPF02928, C5HC2 zinc finger
PfamPF02375, jmjN domain
PfamPF05964, F/Y-rich N-terminus
SMARTSM00558, JmjC
SMARTSM00545, JmjN
SMARTSM00542, FYRC
SMARTSM00541, FYRN

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT5G13790, AT1G47870, AT5G14960

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.692.32E-08
GSE2169Col, rre2, waterCol, rre2, chitin 30 min1.531.09E-07






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