gene detail

Gene description

TAIR ID: AT2G40420

Short description: Transmembrane amino acid transporter family protein

Pathogen responsiveness: -1.30

General responsiveness: -1.99

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

amino acid transport

GO cellular component

plasma membrane, vacuolar membrane, membrane, integral component of membrane

GO molecular function

amine transmembrane transporter activity

Protein domain

Pfam	PF01490, Transmembrane amino acid transporter protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G36010, AT1G47870, AT5G14960

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.91	5.59E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.53	5.55E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.51	2.10E-03