gene detail

Gene description

TAIR ID: AT2G16780

Short description: Transducin family protein / WD-40 repeat family protein

Pathogen responsiveness: -1.83

General responsiveness: -1.05

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated, regulation of transcription, covalent chromatin modification

GO cellular component

cytosol, nucleus, Cul4-RING E3 ubiquitin ligase complex

GO molecular function

molecular_function

Protein domain

Pfam	PF12265, Histone-binding protein RBBP4 or subunit C of CAF1 complex
Pfam	PF00400, WD domain, G-beta repeat
SMART	SM00320, WD40

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G36010, AT1G47870, AT5G14960

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.60	4.25E-10