Gene: AT3G06770
     

Gene description


TAIR ID: AT3G06770

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: 1.01

General responsiveness: 0.41

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


carbohydrate metabolic process


GO cellular component


nucleus, extracellular region


GO molecular function


polygalacturonase activity


Protein domain


PfamPF00295, Glycosyl hydrolases family 28
SMARTSM00710, PbH1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G38250, AT1G47870, AT2G02820, AT4G36990, AT1G14350, AT5G14960

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


49 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-2.342.28E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.371.49E-06
GSE17464Laer, controlLaer, Flg22 2 h-2.091.23E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-3.179.95E-07
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-3.641.10E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-3.168.19E-07
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h-1.917.87E-12
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h-1.773.00E-11
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.971.04E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.268.62E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.686.81E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.521.07E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.521.21E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.477.32E-17
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.812.08E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.331.92E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.653.80E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.476.44E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.771.65E-17
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.715.07E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.731.74E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-3.304.72E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.842.39E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.723.52E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.341.09E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.612.63E-02
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h-1.591.68E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.981.12E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.362.40E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.121.46E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.981.33E-08
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.663.71E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.514.93E-12
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.709.51E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.456.78E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.621.61E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.892.73E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.733.81E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.972.39E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.024.37E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.633.24E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.513.04E-08
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h-1.632.27E-05
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.753.10E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.532.80E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.602.11E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-1.691.15E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.552.15E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.176.32E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.