gene detail

Gene description

TAIR ID: AT2G07690

Short description: Minichromosome maintenance (MCM2/3/5) family protein

Pathogen responsiveness: -2.38

General responsiveness: -1.92

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G075978

Wheat: No orthologous gene

GO biological process

DNA unwinding involved in DNA replication, DNA replication initiation, cell cycle

GO cellular component

nucleus, cytoplasm, THO complex, MCM complex

GO molecular function

ATP binding, DNA helicase activity, DNA-dependent ATPase activity, protein binding, chromatin binding, DNA replication origin binding

Protein domain

Pfam	PF17207, MCM OB domain
Pfam	PF00493, MCM2/3/5 family
Pfam	PF14551, MCM N-terminal domain
SMART	SM00350, MCM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03030: DNA replication

Transcriptional regulation

Regulator:
AT2G36010, AT1G47870, AT5G14960

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.70	7.22E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.77	1.29E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.76	2.78E-10