Gene: AT4G18740
     


Gene description


TAIR ID: AT4G18740

Short description: Rho termination factor

Pathogen responsiveness: -0.33

General responsiveness: 1.68

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


cytosol, mitochondrion, chloroplast


GO molecular function


unkown


Protein domain


PfamPF07498, Rho termination factor, N-terminal domain
SMARTSM00959, Rho_N

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G48160, AT2G36010, AT5G53660, AT5G22220, AT1G47870, AT3G01330, AT5G14960

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.556.69E-06
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.572.06E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.006.14E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-1.549.11E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.719.85E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.541.94E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.292.91E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.352.37E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.871.77E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.571.04E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.008.88E-15
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.421.11E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.601.17E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.745.39E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.141.80E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.542.49E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.053.40E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.591.56E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.