Gene: AT5G61890
     

Gene description


TAIR ID: AT5G61890

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: 0.98

General responsiveness: -1.21

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, defense response to fungus, regulation of transcription, multicellular organism development, ethylene-activated signaling pathway


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
none

Target:
AT1G47870, AT1G62990, AT2G34710, AT5G15630

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


37 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h3.121.51E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min2.404.56E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.991.30E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.606.43E-04
GSE17464Laer, controlLaer, Flg22 2 h2.683.70E-04
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.105.91E-03
GSE17464Penta, controlPenta, Flg22 2 h2.712.93E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.593.06E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.621.56E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.885.97E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.271.18E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.766.10E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.994.34E-04
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.643.33E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.503.21E-07
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.801.25E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h3.225.71E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.788.51E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h3.402.85E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h5.001.95E-11
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.071.22E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.616.49E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.031.38E-05
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h1.577.47E-03
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h1.514.79E-03
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h1.723.17E-03
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h1.797.24E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.161.81E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h2.367.15E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.042.05E-05
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.656.15E-04
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.151.69E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.935.36E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.932.46E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.046.17E-03
GSE6176Col, WT, control 2 hCol, WT, PstDC3000 HrpA- 2 h1.522.62E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.019.50E-03






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