Gene: AT5G43530
     

Gene description


TAIR ID: AT5G43530

Short description: Helicase protein with RING/U-box domain

Pathogen responsiveness: -2.97

General responsiveness: -5.28

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G030768  

Wheat: No orthologous gene

GO biological process


covalent chromatin modification, DNA repair


GO cellular component


chloroplast envelope, nucleus


GO molecular function


ATP binding, zinc ion binding, helicase activity, nucleic acid binding


Protein domain


PfamPF08797, HIRAN domain
PfamPF00097, Zinc finger, C3HC4 type (RING finger)
PfamPF00271, Helicase conserved C-terminal domain
PfamPF00176, SNF2 family N-terminal domain
SMARTSM00184, RING
SMARTSM00910, HIRAN
SMARTSM00490, HELICc
SMARTSM00487, DEXDc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G47870, AT3G27920, AT5G14960

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.383.78E-05






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.