Gene: AT4G13890
     

Gene description


TAIR ID: AT4G13890

Short description: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Pathogen responsiveness: -0.73

General responsiveness: -0.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


glycine metabolic process, L-serine metabolic process, tetrahydrofolate interconversion, pollen development, polar nucleus fusion, glycine biosynthetic process


GO cellular component


cytoplasm


GO molecular function


pyridoxal phosphate binding, glycine hydroxymethyltransferase activity


Protein domain


PfamPF00464, Serine hydroxymethyltransferase

Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT1G47870, AT1G24260, AT5G14960

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.603.09E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.613.80E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.299.77E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d2.743.02E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.553.63E-05
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d2.371.12E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d4.126.11E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.318.87E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.804.45E-12






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