gene detail

Gene description

TAIR ID: AT3G11900

Short description: aromatic and neutral transporter 1

Pathogen responsiveness: -1.55

General responsiveness: -1.65

Orthologous

Rice:

OS03G0817200

Maize:

GRMZM2G173967

Wheat: No orthologous gene

GO biological process

amino acid transport, response to nematode

GO cellular component

endoplasmic reticulum membrane, membrane, integral component of membrane

GO molecular function

aromatic amino acid transmembrane transporter activity, amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity

Protein domain

Pfam	PF01490, Transmembrane amino acid transporter protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G11260, AT1G47870, AT1G24260, AT5G61850, AT5G14960

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.89	1.84E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-2.52	6.46E-13
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-1.62	2.57E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.82	1.80E-10
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.50	1.50E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.13	1.13E-22