Gene: AT3G26680
     


Gene description


TAIR ID: AT3G26680

Short description: DNA repair metallo-beta-lactamase family protein

Pathogen responsiveness: -0.26

General responsiveness: -1.41

Orthologous


Rice:

OS04G0401800  

Maize:

GRMZM2G021802  

Wheat: No orthologous gene

GO biological process


double-strand break repair via nonhomologous end joining, DNA repair, protection from non-homologous end joining at telomere, interstrand cross-link repair


GO cellular component


nucleus, nuclear chromosome, telomeric region


GO molecular function


5'-3' exodeoxyribonuclease activity, damaged DNA binding


Protein domain


PfamPF07522, DNA repair metallo-beta-lactamase

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G47870, AT1G24260, AT5G14960

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.701.30E-05
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.651.36E-05
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min1.951.77E-02
GSE17464Laer, GA+Flg22 0 hLaer, GA+Flg22 2 h-1.514.12E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.751.93E-03
GSE17464Laer, controlLaer, Flg22 1 h3.211.08E-08
GSE17464Laer, controlLaer, Flg22 2 h2.095.03E-05
GSE17464Penta, controlPenta, Flg22 2 h2.732.62E-07
GSE17464Penta, controlPenta, Flg22 2 h1.911.47E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.579.58E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.351.47E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.531.62E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.953.26E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.912.02E-10
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.808.49E-09






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.