Gene: AT3G16740
     

Gene description


TAIR ID: AT3G16740

Short description: F-box and associated interaction domains-containing protein

Pathogen responsiveness: -2.06

General responsiveness: -2.68

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, protein ubiquitination


GO cellular component


nucleus, cytoplasm


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00646, F-box domain
PfamPF07734, F-box associated
SMARTSM00256, FBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G48160, AT2G36010, AT1G47870, AT5G14960

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.971.22E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.152.05E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.961.18E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.352.25E-11






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.