gene detail

Gene description

TAIR ID: AT3G15520

Short description: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Pathogen responsiveness: -0.26

General responsiveness: 1.70

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G117968

Wheat: No orthologous gene

GO biological process

protein peptidyl-prolyl isomerization

GO cellular component

thylakoid lumen, chloroplast thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid lumen, thylakoid

GO molecular function

peptidyl-prolyl cis-trans isomerase activity

Protein domain

Pfam	PF00160, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G47870, AT2G43010, AT5G14960

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.66	4.38E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.81	9.03E-10
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-1.55	3.20E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.98	1.49E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-3.40	4.28E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.65	3.27E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.96	1.78E-05
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.59	2.81E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.63	2.23E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.94	1.67E-08
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.57	1.23E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.60	1.52E-07
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-1.69	1.70E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.65	1.23E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.18	5.18E-06