gene detail

Gene description

TAIR ID: AT5G17420

Short description: Cellulose synthase family protein

Pathogen responsiveness: -2.23

General responsiveness: -1.65

Orthologous

Rice:

OS09G0422500 OS06G0336500 OS08G0345500 OS06G0111800 OS12G0555600

Maize:

GRMZM2G002523

Wheat:

TA.10214.1.S1_AT TA.10214.2.S1_AT TA.10214.3.S1_AT

GO biological process

plant-type secondary cell wall biogenesis, plant-type cell wall biogenesis, rhamnogalacturonan I side chain metabolic process, cellulose biosynthetic process, plant-type primary cell wall biogenesis

GO cellular component

plasma membrane, chloroplast, Golgi apparatus, integral component of membrane

GO molecular function

cellulose synthase activity, metal ion binding, protein binding, cellulose synthase (UDP-forming) activity

Protein domain

Pfam	PF14569, Zinc-binding RING-finger
Pfam	PF03552, Cellulose synthase

Metabolic pathway

PWY-1001: cellulose biosynthesis

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G13890, AT5G12870, AT2G44730, AT5G05410, AT5G10510, AT1G21910, AT3G46090, AT1G47870, AT4G36920, AT1G71930, AT1G61730, AT4G23980, AT5G54680, AT4G37260, AT2G21230, AT5G44210

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.40	2.84E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.22	3.13E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.56	3.53E-03