gene detail

Gene description

TAIR ID: AT1G50640

Short description: ethylene responsive element binding factor 3

Pathogen responsiveness: -0.62

General responsiveness: -1.50

Orthologous

Rice:

OS04G0669200 OS03G0174400

Maize:

GRMZM2G079653

Wheat:

TAAFFX.15371.1.S1_AT

GO biological process

transcription, DNA-templated, negative regulation of ethylene-activated signaling pathway, regulation of transcription, ethylene-activated signaling pathway, defense response, negative regulation of transcription

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850, AT4G36990

Target:
AT2G37090, AT1G17665, AT2G20690, AT1G23360, AT1G21930, AT3G09200, AT2G36200, AT5G35805, AT2G23370, AT3G50030, AT5G35413, AT4G23030, AT3G49870, AT1G75820, AT1G65930, AT3G53920, AT3G19400, AT1G25180, AT1G10455, AT4G15890, AT5G01970, AT4G40065, AT1G32990, AT4G24540, AT5G20370, AT2G45230, AT5G67411, AT1G62180, AT2G23690, AT5G48390, AT3G11840, AT3G56870, AT1G21928, AT2G46990, AT1G32650, AT3G30705, AT1G30795, AT3G52070, AT2G46470, AT1G67430, AT1G19770, AT5G04120, AT3G17750, AT2G35480, AT3G13223, AT1G18420, AT1G25025, AT5G16150, AT5G05510, AT4G01026, AT3G18777, AT3G26640, AT4G36070, AT1G03022, AT2G44525, AT5G11260, AT3G42115, AT4G22690, AT4G15590, AT1G19120, AT3G09850, AT1G33140, AT5G49015, AT5G25820, AT3G12270, AT1G29700, AT2G47690, AT5G37430, AT1G25097, AT1G27570, AT1G20840, AT1G32660, AT4G06581, AT1G42600, AT5G66990, AT5G35631, AT2G19630, AT1G64220, AT3G57230, AT1G33120, AT3G11250, AT5G48710, AT1G12294, AT5G25990, AT1G69920, AT2G32250, AT2G28056, AT3G62360, AT2G28330, AT3G10060, AT1G05925, AT3G50100, AT2G11651, AT1G80550, AT3G02780, AT3G07220, AT2G36340, AT1G62085, AT3G11240, AT4G02200, AT4G29830, AT5G65550, AT1G19560, AT1G21730, AT5G52070, AT4G00752, AT1G21925, AT5G46410, AT1G78270, AT1G16420, AT1G05750, AT3G17320, AT5G01980, AT5G66052, AT2G48140, AT2G18820, AT5G56760, AT5G54940, AT2G45240, AT2G36770, AT2G45920, AT1G55850, AT2G28500, AT1G32890, AT3G10050, AT4G18205, AT1G19810, AT2G22600, AT1G54955, AT2G21960, AT1G56140, AT5G05985, AT5G22790, AT3G27260, AT3G18145, AT4G04790, AT5G28523, AT2G23380, AT1G65270, AT5G16140, AT4G29600, AT5G53460, AT3G54625, AT4G30780, AT4G07820, AT4G37630, AT1G59900, AT1G28320, AT2G30550, AT1G63360, AT5G01080, AT4G22100, AT3G21150, AT1G24580, AT3G61910, AT1G34315, AT2G10280, AT5G64470, AT1G09610, AT2G05610, AT4G04390, AT5G13270, AT2G07180, AT3G19410, AT1G29250, AT4G18197, AT1G02170, AT4G27530, AT5G09655, AT4G06606, AT1G44510, AT2G30870, AT4G02195, AT5G65850, AT4G21220, AT4G29820, AT1G59870, AT2G43190, AT2G13431, AT5G44310, AT2G47680, AT5G05520, AT1G64230, AT1G15125, AT1G03530, AT1G38416, AT4G15885, AT1G02060, AT1G32980, AT1G80620, AT1G79590, AT1G24996, AT1G56220, AT3G54620, AT2G21950, AT5G44290, AT5G48120, AT3G47320, AT5G15630, AT5G59980, AT1G72900, AT2G20720, AT4G19440, AT5G14300, AT3G23175, AT5G08040, AT2G16340, AT1G78915, AT1G01290, AT3G11960, AT5G64460, AT3G56860, AT2G18410, AT5G24557, AT5G61180, AT3G11590, AT3G04150, AT5G45905, AT4G00026, AT4G35800, AT2G16130, AT1G70440, AT3G24070, AT4G25300, AT5G35640, AT3G10040, AT1G44750, AT1G03540, AT3G18140, AT1G24822

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.69	3.39E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.78	5.12E-10
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.92	2.28E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.81	1.25E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.44	2.71E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.19	7.99E-14
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.08	1.87E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.03	5.16E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.99	5.63E-12
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.60	8.54E-08
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.55	1.74E-07
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	3.09	6.28E-21
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.77	1.20E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.64	1.64E-06