Gene: AT4G24540
     


Gene description


TAIR ID: AT4G24540

Short description: AGAMOUS-like 24

Pathogen responsiveness: -1.29

General responsiveness: 1.00

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription from RNA polymerase II promoter, protein import into nucleus, translocation, transcription, DNA-templated, cell differentiation, maintenance of inflorescence meristem identity, regulation of timing of transition from vegetative to reproductive phase, maintenance of floral meristem identity, positive regulation of transcription, positive regulation of vernalization response, floral meristem determinacy, floral whorl development, response to gibberellin


GO cellular component


nucleus, cytoplasm


GO molecular function


protein heterodimerization activity, protein binding, protein homodimerization activity, transcription factor activity, sequence-specific DNA binding, RNA polymerase II regulatory region sequence-specific DNA binding


Protein domain


PfamPF01486, K-box region
PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G15210, AT1G69120, AT1G24260, AT1G50640, AT5G61850

Target:
AT3G30360, AT1G43090, AT5G23750, AT5G07060, AT5G08505, AT5G62998, AT2G21150, AT4G02590, AT5G26970, AT1G57980, AT1G10850, AT3G25727, AT5G44650, AT5G05598, AT1G01890, AT4G37705, AT3G30345, AT2G35250, AT5G04900, AT2G25600, AT5G10150, AT1G73210, AT5G23413, AT3G61220, AT5G22510, AT5G58920, AT2G34540, AT4G30260, AT3G23800, AT1G77095, AT2G22941, AT3G57880, AT2G42790, AT3G26480, AT4G16670, AT5G66870, AT2G34530, AT1G23170, AT5G39610, AT3G42850, AT2G44830, AT2G32110, AT5G66880, AT4G25910, AT2G23220, AT5G06290, AT3G15090, AT1G78840, AT5G61330, AT2G30140, AT1G35400, AT5G12250, AT4G00550, AT4G39240, AT3G14230, AT5G23900, AT5G08510, AT1G73600, AT1G24260, AT4G20270, AT2G35130, AT1G62800, AT4G19040, AT5G63634, AT3G25485, AT3G11130, AT2G21640, AT4G21213, AT2G35260, AT4G32620, AT1G43080, AT5G16640, AT2G29900, AT1G60040, AT3G23070, AT1G53200, AT5G38760, AT4G38770, AT1G05150, AT5G55140, AT2G05620, AT3G07820, AT5G56630, AT5G14710, AT3G28917, AT4G35270, AT3G51500, AT1G73602, AT3G51400, AT3G01890, AT1G28640, AT3G51490, AT5G61850, AT4G28860, AT1G50590, AT4G07470, AT5G11590, AT2G45660, AT1G43100, AT1G54100, AT2G21410, AT1G12060, AT5G53260, AT2G39975, AT3G27920, AT4G39600, AT2G20810, AT2G05300, AT5G19740, AT3G13672, AT1G43110, AT1G77870, AT3G55140, AT1G52730, AT3G29035, AT2G02990, AT3G51210, AT4G04885, AT4G14270, AT5G48170, AT4G28040, AT1G68410, AT3G14067, AT2G38544, AT1G54215, AT5G58850, AT3G02910, AT3G16020, AT3G43580, AT3G03000, AT5G43010, AT4G18960, AT5G63800, AT5G54215, AT2G32795, AT1G43650, AT2G12390, AT1G49850, AT3G25495, AT5G07020, AT3G14460, AT3G07730, AT1G68190, AT5G18260, AT5G06280, AT5G26250

Protein-protein interaction network


The number of partners (degree) is: 20 (Top10%)

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h1.629.73E-14
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h1.775.28E-15
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.738.53E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.592.81E-02
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.551.63E-12






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