Gene: AT4G35800
     

Gene description


TAIR ID: AT4G35800

Short description: RNA polymerase II large subunit

Pathogen responsiveness: -2.77

General responsiveness: -2.39

GO biological process


transcription, DNA-templated, transcription from RNA polymerase II promoter


GO cellular component


chloroplast, DNA-directed RNA polymerase II, core complex, plasmodesma, nucleus, vacuole


GO molecular function


metal ion binding, DNA-directed 5'-3' RNA polymerase activity, protein binding, RNA polymerase II activity


Protein domain


PfamPF05001, RNA polymerase Rpb1 C-terminal repeat
PfamPF04998, RNA polymerase Rpb1, domain 5
PfamPF04983, RNA polymerase Rpb1, domain 3
PfamPF00623, RNA polymerase Rpb1, domain 2
PfamPF04990, RNA polymerase Rpb1, domain 7
PfamPF04992, RNA polymerase Rpb1, domain 6
PfamPF04997, RNA polymerase Rpb1, domain 1
PfamPF05000, RNA polymerase Rpb1, domain 4
SMARTSM00663, RPOLA_N

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G47230, AT5G13790, AT3G15210, AT5G47220, AT1G50640, AT4G17500

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.862.02E-02






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