Gene description
GO biological process
regulation of transcription, DNA-templated, transcription, negative regulation of transcription, photomorphogenesis, red or far-red light signaling pathway, blue light signaling pathway, response to chitin, regulation of flower development
GO cellular component
nucleus, cytoplasm
GO molecular function
protein binding, zinc ion binding, transcription factor activity, sequence-specific DNA binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT5G47230, AT3G15210, AT5G47220, AT1G50640, AT3G20770, AT4G36990, AT4G17500
Target:
none
Protein-protein interaction network
The number of partners (degree) is: 13 (Top20%)
Coexpression network
Differentially expressed condition
13 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE37269 | Di2, WT, control | Di2, WT, TEV 21 d | 2.29 | 1.68E-03 |
GSE37269 | Ler0, WT, control | Ler0, WT, TEV 21 d | 2.32 | 2.73E-04 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 1.76 | 3.19E-12 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 2.36 | 1.77E-14 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.27 | 2.06E-14 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.13 | 3.85E-16 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 2.86 | 1.04E-15 |
GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 4.33 | 2.46E-15 |
GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.81 | 3.00E-14 |
GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 4.30 | 9.44E-16 |
GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 4.35 | 3.95E-15 |
GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -2.76 | 1.24E-03 |
GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -3.36 | 1.77E-04 |
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