Gene: AT2G21950
     

Gene description


TAIR ID: AT2G21950

Short description: SKP1 interacting partner 6

Pathogen responsiveness: -2.06

General responsiveness: -2.87

GO biological process


protein ubiquitination


GO cellular component


chloroplast


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00646, F-box domain
PfamPF01344, Kelch motif
SMARTSM00612, Kelch

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G47230, AT3G15210, AT3G16857, AT4G16110, AT5G47220, AT1G50640, AT5G49450, AT4G36990, AT4G17500

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.542.77E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.571.53E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.684.80E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.951.67E-12
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.645.25E-03






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