Gene: AT5G53460
     

Gene description


TAIR ID: AT5G53460

Short description: NADH-dependent glutamate synthase 1

Pathogen responsiveness: -1.42

General responsiveness: 0.53

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G077054  

Wheat: No orthologous gene

GO biological process


response to cadmium ion, oxidation-reduction process, L-glutamate biosynthetic process, nitrate assimilation, glutamate biosynthetic process, ammonia assimilation cycle, response to cytokinin, developmental growth


GO cellular component


chloroplast stroma, mitochondrion, chloroplast, plastid


GO molecular function


flavin adenine dinucleotide binding, glutamate synthase (NADH) activity, FMN binding, 3 iron, 4 sulfur cluster binding, iron ion binding


Protein domain


PfamPF01493, GXGXG motif
PfamPF00310, Glutamine amidotransferases class-II
PfamPF04898, Glutamate synthase central domain
PfamPF14691, Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PfamPF07992, Pyridine nucleotide-disulphide oxidoreductase
PfamPF01645, Conserved region in glutamate synthase

Transcriptional regulation


Regulator:
AT5G47230, AT3G15210, AT5G11590, AT5G47220, AT1G50640, AT2G43010, AT4G17500

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.584.81E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.942.35E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.544.62E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.722.01E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min-1.642.03E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-1.783.90E-03






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