Gene: AT2G45920
     

Gene description


TAIR ID: AT2G45920

Short description: U-box domain-containing protein

Pathogen responsiveness: -1.33

General responsiveness: 0.81

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G47230, AT3G15210, AT4G35040, AT2G16770, AT5G47220, AT1G50640, AT4G17500

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.705.11E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.701.32E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.051.73E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.171.83E-03






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