Gene: AT5G01980
Gene description
TAIR ID: AT5G01980
Short description: RING/U-box superfamily protein
Pathogen responsiveness: -0.58
General responsiveness: -3.42
GO biological process
unkown
GO cellular component
integral component of membrane
GO molecular function
unkown
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT5G47230, AT3G15210, AT5G47220, AT3G20310, AT1G50640, AT4G17500
Target:
none
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
19 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Laer, control | Laer, Flg22 1 h | 1.73 | 4.58E-06 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 1.64 | 1.05E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 1.79 | 2.38E-06 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 1.62 | 4.26E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 1.65 | 1.77E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 1.58 | 4.16E-05 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 1.58 | 8.12E-07 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 2.06 | 4.83E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.92 | 1.77E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.00 | 3.34E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 1.97 | 8.70E-12 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.19 | 6.14E-09 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 2.23 | 2.32E-09 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 1.72 | 2.75E-07 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 1.71 | 3.65E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 1.62 | 2.96E-07 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 1.92 | 7.84E-21 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 1.60 | 6.63E-16 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.99 | 4.62E-04 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.