Gene: AT1G32990
     

Gene description


TAIR ID: AT1G32990

Short description: plastid ribosomal protein l11

Pathogen responsiveness: 0.23

General responsiveness: 2.10

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G176820  

Wheat: No orthologous gene

GO biological process


translation, ribosomal large subunit assembly, ribosome biogenesis


GO cellular component


chloroplast, cytosolic ribosome, chloroplast stroma, cytosolic large ribosomal subunit, chloroplast envelope, membrane, ribosome


GO molecular function


rRNA binding, structural constituent of ribosome


Protein domain


PfamPF00298, Ribosomal protein L11, RNA binding domain
PfamPF03946, Ribosomal protein L11, N-terminal domain
SMARTSM00649, RL11

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G15210, AT1G50640

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


25 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.901.28E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.192.25E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.065.81E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.054.96E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.682.06E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.555.53E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.257.06E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.951.52E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.851.43E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.256.35E-11
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.784.62E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.011.10E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.193.67E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.682.14E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.841.92E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.107.29E-10
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.642.11E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.191.69E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.646.27E-14
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.532.41E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.781.42E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.851.51E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.997.10E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.946.37E-08
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.892.29E-07






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