gene detail

Gene description

TAIR ID: AT5G16140

Short description: Peptidyl-tRNA hydrolase family protein

Pathogen responsiveness: -0.81

General responsiveness: 0.60

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA splicing, translation, mRNA processing

GO cellular component

chloroplast stroma, chloroplast, intracellular ribonucleoprotein complex

GO molecular function

aminoacyl-tRNA hydrolase activity

Protein domain

Pfam	PF01195, Peptidyl-tRNA hydrolase

Metabolic pathway

PWY490-4: asparagine biosynthesis III (tRNA-dependent)

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G15210, AT1G50640

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	-1.65	1.25E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.72	5.43E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.83	1.60E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.01	1.00E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.56	2.83E-11