gene detail

Gene description

TAIR ID: AT3G56860

Short description: UBP1-associated protein 2A

Pathogen responsiveness: -2.45

General responsiveness: -2.78

Orthologous

Rice:

Maize:

Wheat:

GO biological process

abscisic acid-activated signaling pathway, ethylene biosynthetic process, mRNA stabilization, defense response, cell death, leaf senescence

GO cellular component

nucleus, cytoplasm, cytosol

GO molecular function

protein binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT3G15210, AT1G50640, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.71	3.41E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.68	2.83E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.58	5.60E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.60	1.78E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.54	2.44E-10