gene detail

Gene description

TAIR ID: AT4G02195

Short description: syntaxin of plants 42

Pathogen responsiveness: -1.39

General responsiveness: -1.73

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

vacuolar transport, intracellular protein transport, regulation of defense response to fungus, protein secretion, Golgi organization, vesicle fusion, membrane fusion, vesicle docking

GO cellular component

trans-Golgi network transport vesicle, SNARE complex, Golgi apparatus, trans-Golgi network, integral component of membrane

GO molecular function

SNARE binding, protein binding, SNAP receptor activity

Protein domain

Pfam	PF05739, SNARE domain
SMART	SM00503, SynN
SMART	SM00397, t_SNARE

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04130: SNARE interactions in vesicular transport

Transcriptional regulation

Regulator:
AT5G47230, AT3G15210, AT3G24050, AT4G34680, AT2G45050, AT5G47220, AT3G60530, AT1G50640, AT4G17500

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 25 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	2.38	1.08E-08
GSE17464	Penta, control	Penta, Flg22 2 h	2.40	6.84E-09
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.64	1.90E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	4.28E-03