gene detail

Gene description

TAIR ID: AT3G54620

Short description: basic leucine zipper 25

Pathogen responsiveness: -0.47

General responsiveness: -1.49

Orthologous

Rice:

OS03G0796900

Maize:

GRMZM2G016150

Wheat: No orthologous gene

GO biological process

positive regulation of transcription, DNA-templated, positive regulation of seed maturation, transcription

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein heterodimerization activity, nutrient reservoir activity, protein binding, DNA binding

Protein domain

Pfam	PF00170, bZIP transcription factor
Pfam	PF12498, Basic leucine-zipper C terminal
SMART	SM00338, BRLZ

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G47230, AT3G15210, AT5G47220, AT3G20310, AT1G50640, AT4G36990, AT4G17500

Target:
AT3G30775

Protein-protein interaction network

The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.71	6.38E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.25	3.19E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.55	2.38E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.42	1.32E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.38	1.74E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.28	2.62E-06
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.78	7.06E-11
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.81	6.57E-18
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.70	8.81E-16
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.02	2.68E-20