Gene: AT1G56220
     

Gene description


TAIR ID: AT1G56220

Short description: Dormancy/auxin associated family protein

Pathogen responsiveness: -0.14

General responsiveness: -0.15

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G043338   GRMZM2G073755  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF05564, Dormancy/auxin associated protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G47230, AT3G15210, AT5G11260, AT5G47220, AT1G24260, AT3G47640, AT2G20180, AT1G50640, AT4G17500

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h-1.681.27E-02
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.611.98E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.062.12E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.963.93E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.542.12E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.761.17E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.529.61E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.573.49E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.971.39E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.891.96E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.552.30E-06
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.052.57E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.647.78E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.811.10E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.167.12E-17
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.044.21E-15
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.661.47E-11
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-1.558.49E-09
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.726.46E-11
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.532.86E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.938.57E-14
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.958.11E-14
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.578.48E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.183.20E-03






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