Gene: AT3G11840
     

Gene description


TAIR ID: AT3G11840

Short description: plant U-box 24

Pathogen responsiveness: 1.77

General responsiveness: 0.61

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, respiratory burst involved in defense response, protein autoubiquitination, response to chitin, protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G47230, AT3G15210, AT4G18770, AT5G47220, AT3G20310, AT1G50640, AT4G36990, AT4G17500, AT4G01250

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


66 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.003.25E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.544.19E-10
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.501.32E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min2.862.24E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.903.05E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min4.152.38E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.737.66E-03
GSE17464Laer, controlLaer, Flg22 1 h2.463.06E-05
GSE17464Laer, controlLaer, Flg22 2 h1.634.36E-03
GSE17464Penta, controlPenta, Flg22 2 h2.327.32E-05
GSE17464Penta, controlPenta, Flg22 2 h1.702.97E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.843.86E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.244.56E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.912.49E-04
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.041.17E-11
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.192.26E-12
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.162.97E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.359.51E-09
GSE2169Col, WT, waterCol, WT, chitin 30 min1.741.41E-10
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.075.08E-12
GSE2169Col, rre2, waterCol, rre2, chitin 30 min1.892.35E-11
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.443.46E-08
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.096.97E-08
GSE37255Ws-4, WT, controlWs-4, WT, Hyaloperonospora arabidopsidis strain Emwa1 3 d2.315.39E-03
GSE37255Ws-4, pskr1-5, controlWs-4, pskr1-5, Hyaloperonospora arabidopsidis strain Emwa1 3 d1.623.84E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.014.76E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.444.32E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.063.43E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.923.72E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.851.35E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h4.232.19E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.551.30E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.281.26E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.541.16E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.741.13E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.471.26E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.278.99E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.691.76E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.006.70E-05
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h1.951.10E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.572.36E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.932.29E-12
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.712.97E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h1.653.62E-02
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.762.34E-09
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h1.795.57E-08
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h1.952.62E-09
GSE5615Col, WT, GST 1 hCol, WT, GST+NPP1 1 h1.791.91E-03
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.493.77E-06
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h2.234.05E-05
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h2.214.22E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h1.871.10E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.335.13E-09
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h1.528.16E-05
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.081.12E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.386.28E-03
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h1.574.28E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.313.25E-06
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d2.312.66E-03
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d2.864.74E-04
GSE73351Ws-4, ugt76b1, controlWs-4, ugt76b1, H.ara Emwa1 3 d1.989.37E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.552.50E-16
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.881.27E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.605.30E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.951.65E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.606.10E-03






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