Gene: AT1G32640
     

Gene description


TAIR ID: AT1G32640

Short description: Basic helix-loop-helix (bHLH) DNA-binding family protein

Pathogen responsiveness: -0.03

General responsiveness: 0.35

Orthologous


Rice:

OS10G0575000   OS04G0557200  

Maize:

GRMZM2G001930  

Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, regulation of transcription from RNA polymerase II promoter in response to oxidative stress, response to desiccation, response to jasmonic acid, response to wounding, response to abscisic acid, regulation of sequence-specific DNA binding transcription factor activity, positive regulation of flavonoid biosynthetic process, jasmonic acid mediated signaling pathway, abscisic acid-activated signaling pathway, transcription, response to chitin, regulation of defense response to insect


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF14215, bHLH-MYC and R2R3-MYB transcription factors N-terminal
PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G32640, AT2G43010, AT4G25470

Target:
AT1G32900, AT2G44660, AT3G53470, AT1G73060, AT1G49870, AT4G17490, AT5G24980, AT4G27840, AT1G08170, AT3G52110, AT3G51830, AT2G28330, AT2G15535, AT4G02500, AT1G48130, AT2G01420, AT3G05230, AT5G52510, AT4G20090, AT5G53290, AT5G05220, AT2G38365, AT3G02550, AT4G35690, AT3G18950, AT3G50820, AT5G47220, AT5G01881, AT3G63060, AT1G13740, AT1G28370, AT5G61700, AT4G01530, AT5G27238, AT2G24850, AT5G64940, AT4G40010, AT2G38740, AT5G09930, AT5G66570, AT5G23050, AT3G57520, AT3G04720, AT1G69960, AT5G09410, AT2G05900, AT3G22238, AT5G55470, AT1G51400, AT1G71350, AT2G47140, AT1G55480, AT5G25610, AT3G23240, AT3G16470, AT5G02430, AT5G35460, AT1G55370, AT4G21926, AT2G19770, AT5G07100, AT4G05070, AT3G42798, AT4G31750, AT3G56910, AT1G53560, AT1G19180, AT1G27600, AT3G07390, AT2G24360, AT5G02660, AT5G65140, AT1G21940, AT5G22470, AT5G18910, AT4G37220, AT3G16800, AT4G28370, AT5G24770, AT5G52420, AT5G54320, AT3G05700, AT3G16140, AT1G16540, AT3G43826, AT4G12910, AT2G22240, AT3G54050, AT2G37650, AT4G18920, AT3G62820, AT1G32550, AT1G22860, AT3G21060, AT3G62260, AT2G22010, AT5G24780, AT1G01470, AT3G12320, AT1G73050, AT3G15210, AT5G15560, AT1G70480, AT1G22600, AT2G11190, AT1G67090, AT5G44420, AT1G32640, AT1G11840, AT2G06908, AT2G21300, AT4G19710, AT3G12300, AT4G10730, AT1G71890, AT1G79630, AT5G55640, AT4G31310, AT5G40800, AT4G01880, AT1G22403, AT4G13940, AT1G77450, AT3G45140, AT1G72260, AT3G59060, AT5G16710, AT1G18570, AT5G25100, AT3G62110, AT3G13980, AT3G54890, AT3G56940, AT4G01883, AT5G21920, AT1G21100, AT5G43100, AT5G56210, AT2G32020, AT2G14610, AT1G17420, AT2G05890, AT5G26970, AT3G33154, AT1G05100, AT4G12680, AT1G29930, AT1G19394, AT3G56920, AT1G32560, AT5G11090, AT3G19035, AT4G18140, AT3G56370, AT1G79040, AT5G59080, AT4G34490, AT5G01520, AT1G74930, AT1G77360, AT1G43670, AT2G46340, AT1G77370, AT1G58270, AT5G24970, AT2G38360, AT5G17300, AT5G21930, AT2G40170, AT5G65165, AT3G42086, AT1G19350, AT2G43010, AT1G19210, AT5G64080, AT4G21440, AT3G16910, AT4G27657, AT3G29075, AT3G43521, AT3G29630, AT1G27730, AT2G22241, AT1G07080, AT1G22850, AT1G15430, AT2G30870, AT2G35380, AT4G34450, AT5G16390, AT4G00970, AT3G53000, AT1G35980, AT1G01471, AT1G67785, AT1G32320, AT3G22380, AT3G15250, AT3G15251, AT3G22234, AT4G05071, AT1G56710, AT1G02670, AT5G01075, AT5G25240, AT5G18920, AT3G06780, AT3G55090, AT3G56580, AT5G51460, AT1G77120, AT1G13820, AT3G05710, AT3G21055, AT1G33760, AT1G19650, AT3G12500, AT2G39350

Protein-protein interaction network


The number of partners (degree) is: 47 (Top5%)

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.549.40E-06
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.933.06E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.821.74E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.628.53E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.001.73E-08
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.931.88E-05
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.823.35E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.913.52E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.688.55E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.939.63E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.611.48E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.268.67E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.664.50E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.811.43E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.761.09E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.131.78E-09
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.103.13E-04
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.487.13E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h3.812.19E-07
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.762.99E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.086.68E-06
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.063.28E-06
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.122.39E-12






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.