Gene: AT5G53290

Gene description

TAIR ID: AT5G53290

Short description: cytokinin response factor 3

Pathogen responsiveness: -0.96

General responsiveness: 0.16


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process

cotyledon development, regulation of transcription, DNA-templated, cytokinin-activated signaling pathway, transcription, transcription factor import into nucleus, ethylene-activated signaling pathway, leaf development

GO cellular component

nucleus, cytoplasm

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, DNA binding

Protein domain

PfamPF00847, AP2 domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT2G36270, AT5G11260, AT1G24260, AT2G20180, AT1G32640


Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Differentially expressed condition

7 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.183.49E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.721.28E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.544.45E-07
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.532.50E-07
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.687.74E-04
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.531.94E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.956.36E-08

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