Gene: AT3G56370
     

Gene description


TAIR ID: AT3G56370

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: 0.49

General responsiveness: -0.96

GO biological process


protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway


GO cellular component


integral component of membrane, plasma membrane


GO molecular function


protein serine/threonine kinase activity, ATP binding, protein kinase activity, protein binding, kinase activity


Protein domain


PfamPF07714, Protein tyrosine kinase
PfamPF13516, Leucine Rich repeat
PfamPF13855, Leucine rich repeat
PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF00560, Leucine Rich Repeat
SMARTSM00369, LRR_TYP

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT2G36270, AT5G11260, AT1G24260, AT1G32640, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.641.38E-04
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.893.11E-05
GSE17464Laer, controlLaer, Flg22 1 h-1.786.31E-04
GSE17464Laer, controlLaer, Flg22 2 h-1.728.37E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.714.91E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.991.05E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.703.92E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.613.79E-12
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.142.23E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.221.38E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.122.47E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.812.34E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.463.84E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.597.35E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.212.59E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.611.68E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.075.68E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.977.59E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.493.97E-10
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.863.35E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.731.44E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.864.87E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.123.63E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.962.32E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.957.05E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.751.29E-14
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.552.24E-11
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h-1.515.09E-05
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.571.66E-05
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.771.13E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.832.68E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.472.99E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.541.50E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.