Gene: AT2G38360
     

Gene description


TAIR ID: AT2G38360

Short description: prenylated RAB acceptor 1.B4

Pathogen responsiveness: -0.25

General responsiveness: -1.89

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


vesicle-mediated transport


GO cellular component


Golgi apparatus, endosome, chloroplast, trans-Golgi network, cytosol, endosome membrane, endoplasmic reticulum, integral component of membrane


GO molecular function


molecular_function


Protein domain


PfamPF03208, PRA1 family protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G32640, AT5G41315, AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h1.979.77E-04
GSE17464Laer, controlLaer, Flg22 2 h1.586.92E-03
GSE17464Penta, controlPenta, Flg22 2 h2.055.69E-04
GSE17464Penta, controlPenta, Flg22 2 h1.762.66E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.594.41E-06
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.851.87E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.695.91E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.662.22E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.221.57E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.977.11E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.103.11E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.725.50E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.002.89E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.266.95E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.631.93E-13
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h1.857.79E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.662.17E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.488.91E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.696.08E-04






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