Gene: AT3G56910
     

Gene description


TAIR ID: AT3G56910

Short description: plastid-specific 50S ribosomal protein 5

Pathogen responsiveness: -0.17

General responsiveness: 1.35

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


plastid translation, chloroplast ribulose bisphosphate carboxylase complex biogenesis


GO cellular component


chloroplast, chloroplast thylakoid membrane, chloroplast envelope, ribosome, thylakoid


GO molecular function


molecular_function


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT2G36270, AT5G11260, AT1G32640

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.742.60E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.792.51E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.312.20E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.341.99E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.781.07E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.584.03E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.591.02E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.842.31E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.753.94E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.561.77E-12
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.665.93E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.039.94E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.581.34E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.991.88E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.329.52E-11
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.534.81E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.562.60E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.881.26E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.647.19E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.031.97E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.591.70E-05
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.532.28E-05






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.