Gene: AT3G55090
     


Gene description


TAIR ID: AT3G55090

Short description: ABC-2 type transporter family protein

Pathogen responsiveness: -1.18

General responsiveness: 1.02

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G054332  

Wheat:

TAAFFX.29542.1.S1_AT  


GO biological process


pollen wall assembly


GO cellular component


integral component of membrane, plasma membrane


GO molecular function


ATP binding, ATPase activity, coupled to transmembrane movement of substances


Protein domain


PfamPF01061, ABC-2 type transporter
PfamPF00005, ABC transporter
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT2G36270, AT5G11260, AT5G22570, AT2G46130, AT1G32640

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 46 (Top5%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h2.313.49E-03
GSE17464Laer, controlLaer, Flg22 2 h2.231.96E-03
GSE17464Penta, controlPenta, Flg22 2 h2.321.28E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min1.701.15E-06
GSE2169Col, rre2, waterCol, rre2, chitin 30 min1.534.11E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.561.31E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.993.83E-02






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