gene detail

Gene description

TAIR ID: AT3G62110

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -0.85

General responsiveness: -0.21

Orthologous

Rice:

Maize:

Wheat:

GO biological process

carbohydrate metabolic process, cell wall organization

GO cellular component

vacuole, extracellular region

GO molecular function

polygalacturonase activity, lyase activity

Protein domain

Pfam	PF00295, Glycosyl hydrolases family 28
SMART	SM00710, PbH1

Metabolic pathway

PWY-1081: homogalacturonan degradation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G36270, AT5G11260, AT1G32640

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.31	1.57E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.00	8.25E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.62	3.16E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.51	1.10E-03