Gene: AT1G58270
     


Gene description


TAIR ID: AT1G58270

Short description: TRAF-like family protein

Pathogen responsiveness: 0.62

General responsiveness: 0.70

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


integral component of membrane, cytoplasm, plasmodesma


GO molecular function


unkown


Protein domain


PfamPF00917, MATH domain
SMARTSM00061, MATH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G32640

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.251.25E-07
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.781.72E-02
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-2.322.76E-03
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-3.767.39E-06
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-4.481.08E-08
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-3.902.60E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-4.742.79E-09
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.982.59E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.861.57E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.922.51E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.271.73E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.551.77E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.946.04E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.674.79E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.017.31E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.055.16E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.548.98E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.112.78E-02
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.637.83E-04
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d-2.381.94E-04
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h-1.543.84E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.176.57E-05






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