Gene: AT5G47220
     

Gene description


TAIR ID: AT5G47220

Short description: ethylene responsive element binding factor 2

Pathogen responsiveness: 1.09

General responsiveness: 0.84

Orthologous


Rice:

OS02G0654700   OS04G0546800  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


induced systemic resistance, jasmonic acid mediated signaling pathway, positive regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, cell division, response to chitin, transcription, vasculature development


GO cellular component


nucleus, intracellular


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G11260, AT1G24260, AT1G32640, AT5G61850, AT3G20770, AT5G15850, AT2G47190

Target:
AT1G64220, AT1G42600, AT1G32660, AT1G20840, AT1G25097, AT1G27570, AT4G22690, AT3G04720, AT4G15590, AT1G78270, AT1G16420, AT5G65550, AT1G19560, AT4G02200, AT4G29830, AT2G36340, AT3G50100, AT1G05925, AT3G02780, AT3G10060, AT1G06160, AT5G25990, AT2G32250, AT5G48710, AT1G15950, AT4G40065, AT5G20370, AT4G15890, AT5G01970, AT5G35413, AT3G53920, AT1G25180, AT3G19400, AT1G75820, AT1G65930, AT3G50030, AT5G35805, AT1G23360, AT2G36200, AT1G17665, AT2G20690, AT5G44420, AT3G42115, AT5G11260, AT3G18777, AT3G26640, AT4G36070, AT1G03022, AT1G25025, AT4G01026, AT2G35480, AT3G13223, AT1G67430, AT3G52070, AT2G46470, AT1G32650, AT2G46990, AT3G55730, AT3G11840, AT5G67411, AT1G62180, AT5G48120, AT3G47320, AT2G21950, AT3G54620, AT5G44290, AT1G24996, AT1G80620, AT1G56220, AT4G15885, AT1G38416, AT1G03530, AT1G15125, AT1G64230, AT4G29820, AT5G44310, AT4G02195, AT4G21220, AT3G18140, AT1G24822, AT1G03540, AT3G24070, AT4G00026, AT2G16130, AT4G35800, AT5G61180, AT3G04150, AT3G11960, AT1G72260, AT5G08040, AT5G59980, AT5G15630, AT4G19440, AT2G20720, AT1G72900, AT4G04790, AT3G18145, AT5G28523, AT1G56140, AT3G27260, AT2G21960, AT1G19810, AT1G55850, AT2G45920, AT4G18205, AT3G10050, AT1G32890, AT2G28500, AT5G54940, AT2G36770, AT5G01980, AT1G05750, AT2G18820, AT2G48140, AT1G44510, AT2G30870, AT4G27530, AT5G09655, AT3G10340, AT4G18197, AT2G07180, AT4G04390, AT2G05610, AT5G13270, AT3G21150, AT4G22100, AT3G61910, AT1G34315, AT1G24580, AT1G28320, AT1G59900, AT5G01080, AT2G30550, AT1G63360, AT5G53460, AT4G30780, AT3G54625

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


35 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.611.22E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.392.39E-08
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d1.681.17E-03
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.767.83E-11
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.445.72E-07
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.781.77E-05
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.555.22E-05
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d1.542.06E-04
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d1.617.60E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-2.031.26E-05
GSE37255Ws-4, WT, controlWs-4, WT, Hyaloperonospora arabidopsidis strain Emwa1 3 d3.702.91E-04
GSE37255Ws-4, pskr1-5, controlWs-4, pskr1-5, Hyaloperonospora arabidopsidis strain Emwa1 3 d3.852.70E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.721.99E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.511.86E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.959.59E-05
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.809.18E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.044.98E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.101.32E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.688.58E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.363.13E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.161.24E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.262.41E-03
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.742.63E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.244.00E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.852.52E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.011.04E-08
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.912.50E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h1.617.79E-04
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h1.911.42E-03
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h1.663.91E-03
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.412.36E-06
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d3.702.56E-05
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d2.711.52E-04
GSE73351Ws-4, ugt76b1, controlWs-4, ugt76b1, H.ara Emwa1 3 d3.525.17E-05
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.975.82E-11






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