Gene: AT1G17420
     

Gene description


TAIR ID: AT1G17420

Short description: lipoxygenase 3

Pathogen responsiveness: 1.28

General responsiveness: 1.03

Orthologous


Rice:

OS03G0179900  

Maize: No orthologous gene
Wheat:

TA.12757.1.A1_AT  TA.12757.1.A1_S_AT  


GO biological process


anther development, growth, defense response, jasmonic acid biosynthetic process, response to wounding, lipid oxidation, anther dehiscence, response to fungus, oxylipin biosynthetic process, stamen filament development, response to jasmonic acid, pollen development, response to high light intensity


GO cellular component


chloroplast


GO molecular function


linoleate 13S-lipoxygenase activity, metal ion binding


Protein domain


PfamPF00305, Lipoxygenase
PfamPF01477, PLAT/LH2 domain
SMARTSM00308, LH2

Transcriptional regulation


Regulator:
AT5G13790, AT2G38250, AT2G03340, AT1G62300, AT1G74930, AT5G11260, AT1G27730, AT1G24260, AT1G32640, AT4G31550, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


42 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h2.711.28E-02
GSE12856Col, WT, controlCol, WT, Bg h1.593.13E-02
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.342.90E-03
GSE17464Laer, controlLaer, Flg22 1 h1.895.00E-03
GSE17464Penta, controlPenta, Flg22 2 h1.856.05E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.615.96E-10
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.379.80E-11
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.252.47E-10
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.571.56E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.641.64E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.994.57E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.771.41E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.561.39E-05
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.514.40E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.068.58E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.874.66E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.355.54E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.207.45E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.361.17E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.562.28E-09
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.182.88E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.671.71E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.052.78E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.066.40E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h4.729.07E-09
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.414.38E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h3.172.54E-09
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.867.73E-04
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h3.155.07E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.061.62E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h3.385.31E-10
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.928.67E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.952.51E-08
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.751.86E-03
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.657.75E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.021.53E-04
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h3.181.20E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.671.39E-07
GSE5686Col, WT, control 4 dCol, WT, G.orontii 4 d-1.767.42E-04
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.075.64E-15
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min1.903.88E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.533.26E-02






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