Gene: AT2G39350
     

Gene description


TAIR ID: AT2G39350

Short description: ABC-2 type transporter family protein

Pathogen responsiveness: 0.48

General responsiveness: 2.06

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


pollen wall assembly, response to nematode


GO cellular component


plasma membrane, integral component of membrane


GO molecular function


ATPase activity, coupled to transmembrane movement of substances, ATP binding


Protein domain


PfamPF01061, ABC-2 type transporter
PfamPF00005, ABC transporter
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT4G18770, AT2G36270, AT5G11260, AT1G24260, AT1G32640, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


28 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min1.802.54E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.577.71E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.182.65E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.522.59E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.441.74E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.416.98E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.581.01E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.541.10E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.862.24E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.173.58E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.152.60E-05
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.993.96E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.141.11E-07
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.878.79E-07
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.215.25E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.489.70E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h3.791.27E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.429.79E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.973.32E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.309.25E-12
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.691.12E-06
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.511.22E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.601.90E-13
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.863.16E-08
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.311.20E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.423.05E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.636.14E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.661.91E-05






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