Gene: AT5G15850
     


Gene description


TAIR ID: AT5G15850

Short description: CONSTANS-like 1

Pathogen responsiveness: -0.42

General responsiveness: 1.89

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of flower development, regulation of transcription, DNA-templated, response to light stimulus, circadian rhythm, transcription


GO cellular component


nucleus


GO molecular function


protein binding, identical protein binding, DNA binding, transcription factor activity, sequence-specific DNA binding, zinc ion binding


Protein domain


PfamPF06203, CCT motif
PfamPF00643, B-box zinc finger
SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
AT5G47220

Protein-protein interaction network


The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-2.092.45E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.377.56E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.237.27E-03
GSE2169Col, rre1, waterCol, rre1, chitin 30 min-1.661.76E-07
GSE2169Col, rre2, waterCol, rre2, chitin 30 min-1.852.73E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.962.71E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.521.61E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.539.45E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.011.38E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.503.73E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.941.75E-03






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