Gene: AT1G06160
     

Gene description


TAIR ID: AT1G06160

Short description: octadecanoid-responsive Arabidopsis AP2/ERF 59

Pathogen responsiveness: 1.14

General responsiveness: -0.67

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to jasmonic acid, regulation of transcription, DNA-templated, transcription, jasmonic acid and ethylene-dependent systemic resistance, ethylene-activated signaling pathway, response to ethylene


GO cellular component


nucleus, intracellular


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G38470, AT5G47220, AT1G24260

Target:
AT5G44420, AT3G12500

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


30 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h3.072.88E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.101.93E-09
GSE15236Col, pft1, controlCol, pft1, F.oxysporum-2.491.84E-03
GSE17464Laer, controlLaer, PstDC3000 12 h-1.813.94E-03
GSE17464Penta, controlPenta, PstDC3000 12 h-2.592.12E-05
GSE17464Penta, controlPenta, Flg22 2 h-2.475.19E-05
GSE17464Penta, controlPenta, Flg22 2 h-1.694.49E-03
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d2.431.19E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.851.36E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.821.55E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.651.99E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.796.74E-08
GSE37255Ws-4, WT, controlWs-4, WT, Hyaloperonospora arabidopsidis strain Emwa1 3 d4.621.49E-03
GSE37255Ws-4, pskr1-5, controlWs-4, pskr1-5, Hyaloperonospora arabidopsidis strain Emwa1 3 d4.393.36E-03
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.255.01E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d2.101.44E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.113.96E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.149.09E-13
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h5.781.36E-08
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.701.09E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.255.05E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.136.77E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.744.09E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.122.62E-02
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h3.387.72E-07
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h2.729.24E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.214.29E-07
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d4.622.37E-05
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d4.203.27E-05
GSE73351Ws-4, ugt76b1, controlWs-4, ugt76b1, H.ara Emwa1 3 d3.887.69E-05






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