Gene: AT5G47230
     

Gene description


TAIR ID: AT5G47230

Short description: ethylene responsive element binding factor 5

Pathogen responsiveness: 0.91

General responsiveness: 0.59

Orthologous


Rice:

OS04G0547600   OS04G0648900  

Maize:

GRMZM2G475678   GRMZM2G057386  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, ethylene-activated signaling pathway, response to cold, transcription, positive regulation of transcription, response to chitin, defense response


GO cellular component


nucleus, intracellular


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G23810, AT1G24260, AT5G61850, AT3G20770

Target:
AT4G15590, AT4G22690, AT1G25097, AT1G27570, AT1G32660, AT1G20840, AT1G42600, AT1G64220, AT5G48710, AT2G32250, AT5G25990, AT3G10060, AT3G02780, AT1G05925, AT3G50100, AT2G36340, AT4G29830, AT4G02200, AT1G19560, AT5G65550, AT1G16420, AT1G78270, AT2G20690, AT1G17665, AT2G36200, AT1G23360, AT5G35805, AT3G50030, AT1G65930, AT1G75820, AT3G53920, AT3G19400, AT1G25180, AT5G35413, AT5G01970, AT4G15890, AT5G20370, AT4G40065, AT1G62180, AT5G67411, AT3G11840, AT1G32650, AT2G46990, AT3G52070, AT2G46470, AT1G67430, AT3G13223, AT2G35480, AT4G01026, AT1G25025, AT4G36070, AT1G03022, AT3G18777, AT3G26640, AT3G42115, AT5G11260, AT4G21220, AT4G02195, AT5G44310, AT4G29820, AT1G64230, AT1G03530, AT1G15125, AT1G38416, AT4G15885, AT1G56220, AT1G80620, AT1G24996, AT5G44290, AT3G54620, AT2G21950, AT3G47320, AT5G48120, AT2G20720, AT1G72900, AT4G19440, AT5G15630, AT5G59980, AT5G08040, AT3G11960, AT3G04150, AT5G61180, AT4G00026, AT4G35800, AT2G16130, AT3G24070, AT1G03540, AT1G24822, AT3G18140, AT2G48140, AT2G18820, AT1G05750, AT5G01980, AT2G36770, AT5G54940, AT1G32890, AT2G28500, AT4G18205, AT3G10050, AT2G45920, AT1G55850, AT1G19810, AT2G21960, AT3G27260, AT1G56140, AT5G28523, AT4G04790, AT3G18145, AT3G54625, AT4G30780, AT5G53460, AT1G63360, AT2G30550, AT5G01080, AT1G28320, AT1G59900, AT1G24580, AT1G34315, AT3G61910, AT3G21150, AT4G22100, AT5G13270, AT2G05610, AT4G04390, AT2G07180, AT4G18197, AT5G09655, AT4G27530, AT2G30870, AT1G44510

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


30 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.791.13E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.591.79E-02
GSE17464Laer, controlLaer, Flg22 1 h2.071.02E-03
GSE17464Penta, controlPenta, Flg22 2 h2.273.20E-04
GSE17464Penta, controlPenta, Flg22 2 h1.735.30E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min3.901.11E-11
GSE2169Col, rre1, waterCol, rre1, chitin 30 min3.915.75E-12
GSE2169Col, rre2, waterCol, rre2, chitin 30 min3.367.49E-11
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.734.18E-08
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.646.97E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.531.16E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.171.69E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.883.48E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.663.57E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.521.67E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.603.11E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.563.77E-08
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.391.04E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min4.431.11E-04
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.084.16E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.471.14E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.256.13E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.891.99E-10
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.652.25E-06
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.683.63E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.712.96E-07
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.552.24E-06
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min4.202.14E-15
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.221.17E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.744.59E-02






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