Gene: AT5G12250
     

Gene description


TAIR ID: AT5G12250

Short description: beta-6 tubulin

Pathogen responsiveness: 0.07

General responsiveness: -1.12

GO biological process


response to salt stress, microtubule-based process, response to cold


GO cellular component


plasma membrane, cytoplasm, microtubule cytoskeleton, microtubule


GO molecular function


GTP binding, GTPase activity


Protein domain


PfamPF03953, Tubulin C-terminal domain
PfamPF00091, Tubulin/FtsZ family, GTPase domain
SMARTSM00865, Tubulin_C
SMARTSM00864, Tubulin

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G24540, AT2G45660, AT5G61850, AT2G43010, AT2G22540

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-1.702.95E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.751.08E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.111.25E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.914.77E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.892.59E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.336.56E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.952.20E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.052.65E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.581.48E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.228.89E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.753.37E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.461.73E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.807.30E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.615.76E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.703.90E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.052.15E-11
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.581.29E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.581.41E-07
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.005.76E-11
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.955.63E-04






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